Table of Contents

  • Getting Started
  • Tutorial
  • Parallelism and Multithreading
  • Calling Python from Seq
  • Calling Seq from C/C++
  • Cookbook
  • Building from Source
  • Standard Library Reference

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Standard Library ReferenceΒΆ

  • algorithms
    • algorithms.heapsort
    • algorithms.insertionsort
    • algorithms.pdqsort
    • algorithms.qsort
    • algorithms.strings
    • algorithms.timsort
  • bio
    • bio.align
    • bio.bam
    • bio.bed
    • bio.block
    • bio.builtin
    • bio.bwa
    • bio.bwt
    • bio.c_htslib
    • bio.fai
    • bio.fasta
    • bio.fastq
    • bio.fmindex
    • bio.intervals
    • bio.iter
    • bio.kmer
    • bio.locus
    • bio.prefetch
    • bio.pseq
    • bio.seq
    • bio.types
    • bio.vcf
  • bisect
  • collections
  • functools
  • getopt
  • gzip
  • heapq
  • internal
    • internal.__init_test__
    • internal.attributes
    • internal.box
    • internal.builtin
    • internal.c_stubs
    • internal.dlopen
    • internal.file
    • internal.gc
    • internal.internal
    • internal.khash
    • internal.python
    • internal.sort
    • internal.str
    • internal.types
      • internal.types.array
      • internal.types.bool
      • internal.types.byte
      • internal.types.collections
        • internal.types.collections.dict
        • internal.types.collections.list
        • internal.types.collections.set
      • internal.types.error
      • internal.types.float
      • internal.types.generator
      • internal.types.int
      • internal.types.intn
      • internal.types.optional
      • internal.types.ptr
      • internal.types.range
      • internal.types.slice
      • internal.types.str
  • itertools
  • math
  • openmp
  • operator
  • os
    • os.path
  • pickle
  • python
  • random
  • sortedlist
  • statistics
  • string
  • sys
  • threading
  • time

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