bio.bwt
¶
Source code: bio/bwt.seq
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extension
seq
¶ Methods:
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suffix_array
()¶ Suffix array of this sequence as a list of integers
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bwt
()¶ Burrows-Wheeler transform of this sequence (contains $)
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lcp
(sa: list[int])¶ Longest common prefix array based on suffix array [https://rahmannlab.gitlab.io/algorithmen-auf-sequenzen/pdfs/skript-aas.pdf](https://rahmannlab.gitlab.io/algorithmen-auf-sequenzen/pdfs/skript-aas.pdf), p. 61
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-
extension
pseq
¶ Methods: