bio.iter

Source code: bio/iter.seq

type bio.iter.SeqReader

Parser for a plain txt-based sequence format, with one sequence per line.

Properties:

file
gzfile

Magic methods:

__init__(path: str, validate: bool, gzip: bool, copy: bool)
__seqs__()
__iter__()
__blocks__(size: int)
__enter__()
__exit__()

Methods:

close()
bio.iter.Seqs(path: str, validate: bool = True, gzip: bool = True, copy: bool = True)
extension str

Magic methods:

__seqs__()
__blocks__(size: int)