.. seq:module:: bio.pseq

:seq:mod:`bio.pseq`
-------------------

Source code: `bio/pseq.seq <https://github.com/seq-lang/seq/blob/master/stdlib/bio/pseq.seq>`_

.. seq:class:: pseq

   
       Amino acid sequence
   

   **Magic methods:**

      .. seq:method:: __new__(p : cobj, n : int)
         :noindex:

      .. seq:method:: __new__(s : str)
         :noindex:

      .. seq:method:: __eq__(other : pseq)
         :noindex:

      .. seq:method:: __ne__(other : pseq)
         :noindex:

      .. seq:method:: __lt__(other : pseq)
         :noindex:

      .. seq:method:: __le__(other : pseq)
         :noindex:

      .. seq:method:: __gt__(other : pseq)
         :noindex:

      .. seq:method:: __ge__(other : pseq)
         :noindex:

      .. seq:method:: __str__()
         :noindex:

      .. seq:method:: __len__()
         :noindex:

      .. seq:method:: __bool__()
         :noindex:

      .. seq:method:: __hash__()
         :noindex:

      .. seq:method:: __getitem__(idx : int)
         :noindex:

      .. seq:method:: __getitem__(s : Slice)
         :noindex:

      .. seq:method:: __copy__()
         :noindex:

      .. seq:method:: __iter__()
         :noindex:

      .. seq:method:: __reversed__()
         :noindex:

   **Methods:**

      .. seq:method:: split(k : int, step : int)

            
                    Iterator over length-`k` subsequences of the given sequence
                    with the specified step size.
            




.. seq:function:: translate(s : seq, table : Optional[Dict[seq, pseq]] = None)

   
       Performs DNA to amino acid translation. An optional mapping from
       length-3 DNA sequences to amino acids can be given via `table`,
       otherwise the standard mapping is assumed.
   



.. seq:extension:: seq

   **Methods:**

      .. seq:method:: translate()



.. seq:extension:: str

   **Magic methods:**

      .. seq:method:: __prefix_p__[N](s : str)
         :noindex: